Mini-prep
Mini-prep kdorfman Thu, 09/15/2022 - 15:33Keep stocks of 2 mini-prep kits:
Qiagen
Zymo Classic D4015
Qiagen
Qiagen kdorfman Thu, 09/15/2022 - 19:53Jeff's CMBL miniprep
Zymo miniprep classic
Zymo miniprep classic kdorfman Thu, 09/15/2022 - 19:53For many labs
Before beginning, add 95% ethanol to Plasmid Wash Buffer 4:1 Also, once RNAse has been added to P3 (yellow), keep it at 4C.
Protocol
Spin 0.5 - 5 mL bacterial culture in 1.5 mL tube 20 sec full speed
Add 200 uL P1 (red), resuspend pellet
Add 200 uL P2 (green); mix by inverting 2-4 times. Clear, viscous, purple solution indicates cell lysis
Add 350 uL P3 (yellow). Mix thoroughly. DO NOT VORTEX. Turns yellow when neutralization is complete.
Incubate RT 1-2 min
Spin 2 min
Put column into collection tube, transfer supernatant. DO NOT DISTURB GREEN PELLET (I found it wasn't green, but OK)
Spin 30 sec
Discard flow through, put column back into emptied collection tube
Add 200 uL Endo-Wash Buffer to the column, spin 30 sec
Add 400 uL Plasmid wash buffer to the column, centrifuge 1 min
Transfer column to clean 1.5 mL microcentrifuge tube
Add 30 uL DNA Elution Buffer
Spin 30 seconds. Plasmid DNA is in the collection tube
Students need per reaction1
1 mL (?) overnight culture of transformed cells (or spun down pellet of ON culture)
1 column, 1 2-mL collection tube
sterile 1.5 mL tube
~200 uL P1 (red)
~200 uL P2 (green)
~350 uL P3 (yellow)
~200 uL Endo-Wash-Buffer
~400 Plasmid Wash Buffer
~30 uL DNA Elution Buffer
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All the ingredients are sold separately, so it's OK to give students some extra to allow for pipetting errors. ↩︎